Toolyard

PvuII Recognition Site


PvuII at a glance

5' CAG|CTG 3'
3' GTC|GAC 5'
Recognition site5'-CAGCTG-3'
CutCAG^CTG
Endsblunt ends
Expected frequencyabout once every 4,096 bp in random DNA

How to find PvuII sites in a sequence

  1. Paste a DNA sequence or FASTA record into the box above. PvuII is already entered under Only these enzymes.
  2. Tick Circular DNA for a plasmid, so a site that spans the end and the start is found.
  3. The map marks each PvuII cut with its position. Copy or download the output below it.

Frequently asked questions

What sequence does PvuII cut?

PvuII recognizes CAGCTG (written 5' to 3') and cuts the top strand at CAG^CTG.

Does PvuII leave sticky or blunt ends?

Blunt ends, with no overhang.

How often does PvuII cut?

A site like CAGCTG turns up about once every 4,096 bp in random DNA. Real sequences vary, so check yours above.

Restriction enzymes

More DNA and protein sequence tools

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