Toolyard

EMBL Translation Extractor

How to get protein sequences from an EMBL file

  1. Paste one or more EMBL records.
  2. The /translation of every CDS is listed as a protein FASTA record, titled with its gene or product name.
  3. Copy output or Download saves the result.

Frequently asked questions

Where do the protein sequences come from?

From the /translation qualifier stored with each CDS in the record. A CDS without one is skipped.

Is my sequence uploaded?

No. Everything runs in your browser, so your sequences never leave your device.

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