Toolyard

How to Use a Punnett Square

Setting it up

  1. Write the alleles each parent can pass on. An Aa parent gives A or a.
  2. Put one parent's alleles along the top and the other's down the side.
  3. Fill each box with the allele from its column and its row.

One gene: Aa × Aa

The four boxes are AA, Aa, Aa and aa, a genotype ratio of 1 : 2 : 1. If A is dominant, three of the four show the dominant trait, a phenotype ratio of 3 : 1. Each box is a probability for each child, not a promise about a family of four.

Two genes: AaBb × AaBb

Each parent can pass on AB, Ab, aB or ab, so the square is 4 × 4 with 16 boxes. When the genes sort independently and both show simple dominance, the phenotypes come out 9 : 3 : 3 : 1.

From families to populations

Hardy-Weinberg does the same for a whole population. If p and q are the frequencies of A and a, the genotypes are expected at p², 2pq and q². If 16% of people are aa, q = 0.4, p = 0.6 and 48% are carriers (Aa).

Calculators

The Punnett Square Calculator draws the square for any cross and gives the ratios. The Hardy-Weinberg Calculator gives allele frequencies from genotype counts and tests whether a population is in equilibrium.

Traits on the X chromosome

For a recessive trait on the X chromosome, such as red-green color blindness, cross a carrier mother (XAXa) with an unaffected father (XAY):

XAY
XAXAXAXAY
XaXAXaXaY

No daughters are affected, but half are carriers. Each son has a 1 in 2 chance of being affected.

Other patterns

  • Incomplete dominance. Crossing red and white snapdragons gives pink flowers. Crossing two pinks gives red, pink and white in a 1 : 2 : 1 ratio, because each genotype has its own look.
  • A test cross. To find out whether a dominant-looking parent is AA or Aa, cross it with aa. Any recessive offspring show that the parent is Aa.

Several children

Each child is a separate event, so multiply the chances. For two Aa parents, the chance that two children are both aa is ¼ × ¼ = 1/16.

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